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Author:Simone Mesman

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HBO/WO

MBO

2024

How to design open inquiry labs

In this article we show how student “open inquiries” in undergraduate labs can be powerful teaching and assessment methods. In such open inquiries it is the students who define the question they want to answer, formulate the hypothesis, search for information, design and carry out experiments to reach their goal, and share their ideas, needs, and results with others. This student agency afforded by open inquiry trains critical thinking, teaches students to learn from failure, and requires effective science communication in authentic contexts. Adapting open inquiry methods for the first time can be especially daunting for instructors who have no examples to draw upon. To address this challenge we explain the findings of a diverse group of five lab instructors and an educational researcher who have compared open inquiry practices in different contexts. As a group, we formed a Community of Practice dedicated to “Supporting students’ scientific Open Inquiries in Labs” (aka SssOIL). The commonalities across our diverse project team suggest some defining features and best practices. By sharing our findings and example course designs and materials, we hope to aid instructors in adapting more open inquiry teaching methods in their own lab courses. Any questions about this article can be addressed to Forrest via: forrestbradbury@gmail.com or to our team via: S3OIL@outlook.com

Document

Forrest Bradbury, Simone Mesman, Morten Stromme, Paul Logman

2023

Supporting Students’ Scientific Open Inquiries in Labs (SssOIL) collection

Supporting Students’ Scientific Open Inquiries in Labs (aka SssOIL) is a group devoted to using and sharing open inquiry teaching methods in higher education science lab courses. The group members are: Lesley de Putter: Eindhoven School of Education (Eindhoven University of Technology) Paul Logman: Physics & ICLON (Leiden University) Morten Strømme: Institute for Interdisciplinary Studies (University of Amsterdam) Simone Mesman: Swammerdam Life Sciences (University of Amsterdam) Martijs Jonker: Swammerdam Life Sciences (University of Amsterdam) Forrest Bradbury: Amsterdam University College This page contains links to the group's playbook for open inquiry (both English and Dutch) and the sub-pages below link to individual collections of course materials from several open inquiry lab courses, as well as the team's article on "How to design open inquiry labs". Any questions about this entire collection can be addressed to our team via: S3OIL@outlook.com

Document

Forrest Bradbury, Paul Logman, Simone Mesman, Morten Stromme

2020

Course schedule & setup Molecular Neurobiology

In the Read-me file, you'll find a description of the set-up of the course and a crude planning of the course. The Excel file shows a detailed example schedule.

Document

Forrest Bradbury, Simone Mesman

2020

Assignments (and rubrics) Molecular Neurobiology

During the course students are assessed on different skills and assignments Practical skills: Students work together as a labgroup in the lab to perform the experiments in order to answer their research questions. They are assessed on their individual practical skills but also on their teamwork in the lab. See the rubric Practical Skills_Molecular Neurobiology for the complete assessment model. Academic Attitude: Students are individually assessed on their Academic Attitude (e.g. Participation, Critical Reflection, Feedback) during the entire course. See the rubric Academic Attitude_Molecular Neurobiology for the complete assessment model. Short report: Students will write a short report (scientific article format) in English about their research, together with their lab partner. In this report they discuss the results of their research group and try to answer the research question. The report typically contains an abstract (~250 words), introduction (~500 words), materials and methods (~500 words), results including figures (~1000 words), and discussion (~500 words). References are in Harvard style and are not taken into account for the total word-count, which also holds true for the figure legends. See the rubric Report_Molecular Neurobiology for the complete assessment model. Exam: Everything can be tested on the exam. The exam is mainly focused on techniques and corresponding experimental strategies (e.g. explain how you would research the following research question, using technique X). The exam material entails all information treated during this course (lectures, lab meetings, practicals, and assignments). During the exam students can make use of Alberts (The Cell) the information in Labbuddy and ExperD, and their labjournal. The exam is in Dutch. See Practice exam and answering model_Molecular Biology for example questions and an answering model Presentation: During the course the students give several presentations in English (Journal Club, Lab meeting, and Final presentation). The presentations are assessed as a whole and as a group. However, a student could receive a different grade than the rest of the group by standing out positively or negatively during the presentations. See the rubric Presentation_Molecular Neurobiology for the complete assessment model. Journal Club: During the journal club two papers are discussed, a paper about ALS research and a paper about PD research, by means of a presentation by an ALS-group and a PD-group respectively. Everyone is expected to critically read and analyse both papers. They can make use of PerUsAll to analyse the paper as a group (see PerUsAll link below) Students need to think about whether they agree with the conclusions drawn by the authors, the chosen methods, the analysis of the results, and whether they would do anything differently. The presentation should at least contain; the research question/hypothesis of the paper, the main results (discuss the key figures of the article), the drawn conclusions, and the future research that is suggested. The presentation takes 30 minutes with 10 minutes discussion. The papers can be found under Papers Journal Club Molecular Neurobiology. Lab meetings: During the lab meetings the PD- and ALS-groups discuss their results and research strategy. Students present their research question, hypothesis, experimental design, and expectations backed-up by current literature. They also present and evaluate the results of the previous week and discuss their research strategy of the coming week. The other people present during the lab meeting can give feedback on the analyses and research strategy in order to improve the quality of the research. Lab meetings are held in English and take about one hour per group. Final Presentation: During the final presentation students present their research of the last weeks and the main conclusions in a scientific presentation. The presentation contains a short introduction of the subject, the experimental strategy and most important materials and methods, results, conclusion and a critical evaluation of the results in light of the current literature. The final presentation is 30 minutes with 10-15 minutes room for discussion.

Document

Simone Mesman

2020

Rubrics Molecular Neurobiology

Here you can find the rubrics (assessment models) that are used to grade the different assignments of the course Molecular Neurobiology, year 3 Psychobiology, UvA. There are rubrics for the assessment of the presentations, practical skills, academic attitude, and the report. The different parts of the Rubric are assessed as follows: Exemplary: 10 out of 10 Advanced: 7 out of 10 Developing: 4 out of 10 Beginning: 1 out of 10 The different components have their own weightings. This has already been taken into account in the assessment of each component (for example, there are a maximum of 5 points to be earned for "exemplary" instead of 10 when a component is weighted at 0.5x).

Document

Simone Mesman

2020

Papers Journal Club Molecular Neurobiology

Here you can find the papers that are used for the journal club of the course Molecular Neurobiology, Year 3 Psychobiology, UvA. In this journal club, students present the paper that corresponds to their specific topic (respectively ALS and PD) to the students from a different group and vice versa. The overall goal is for them to critically examine the data in the papers and how the paper is structured.

Website

Simone Mesman

2020

Student reading material per subject Molecular Neurobiology

At the start of the course the students are divided into four labgroups of which two will focus on ALS and two on PD. We selected three papers per subject (ALS-1 to -3 and PD-1 to -3) to start them of with some background reading. They should select more papers as a group, but this will give them some background information and can help them in finetuning their search

Website

Simone Mesman

2020

Course Objectives Molecular Neurobiology

The overall learning goal of this course is that students become familiar with the difficulties of scientific research. They need to become aware of what kind of information a specific model system can give you and what the specific strengths and shortcomings of different approaches and experiments are. The attached document further specifies the learning goals of the course.

Document

Forrest Bradbury, Simone Mesman

2020

Resource list Molecular Neurobiology

The resources used for Molecular Biology are: Facilities: Practical rooms for labwork Practical rooms for cell culture Lecture halls Rooms for labmeetings Necessities: Protocols (see attached learning material (Reader Molecular Neurobiology)) Equipment and consumables (attached file) Software LabBuddy and ExperD as online reader and experiment designer (see link)

Spreadsheet

Simone Mesman

2020

Reader Molecular Neurobiology

For the course Molecular Neurobiology we make use of an online reader and labjournal. The reader is implemented in LabBuddy (see link below). Here we give the students all the information they need on the course, assignments, and expectations Protocols, toolbox and labjournal is implemented in ExperD, a subpage of labbuddy. Here the students can find all the protocols they can use for their experiments (files marked P), tools they can use (files marked T), and make a schematic overview of their workflow. The online grocery list is a list of all the tools and necessities for their experiments that the students can request at the start of the week from the TA's

Document

Simone Mesman