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BOOST! TU/e Education Innovation

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6 april 2022

Essential skills for applying machine learning methods for medical image analysis.

This repository contains a number of tutorials on essential skills for applying machine learning methods for medical image analysis. The tutorials are still work in progress. Thus far, the following tutorials are implemented: Python essentials Numerical and scientific computing in Python Working with medical images in Python Deep learning with Keras Linux essentials Git essentials

Website

Mitko Veta

29 maart 2022

Interactive worksheets as a resource for teaching building performance and energy systems simulation

Jupyter Notebooks that are used as interactive worksheets for the course 7LY3M0 - Building performance and energy systems simulation.

Document

Roel Loonen

21 maart 2022

Medical Image Analysis

This course is a sequel to the image processing course (8DB00) in the TU/e bachelor program Biomedical Engineering. In the Medical Image Analysis course (8DC00), we concentrate on more advanced image analysis methods and on how they can be used to tackle clinical problems. Topics covered include image registration, computer-aided diagnosis and machine learning. The course has a very strong focus on programming (implementing medical image analysis methods) in Python and relies on previous knowledge of calculus and linear algebra.

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Maureen Eijnatten, van, Mitko Veta, Veronika Cheplygina, Daniel Krahulec, Evi M.C . Huijben

5 december 2021

Python package for building isosurfaces from 3D scalar fields

Python package for building isosurfaces from 3D scalar fields Python package for evaluating integrals of Gaussian type orbitals in electronic structure calculations

Website

Ivo Filot

22 februari 2021

Python package for calculating one- and two-electron integrals

PyQInt is a Python package for calculating one- and two-electron integrals as encountered in electronic structure calculations. Since integral evaluation can be quite computationally intensive, they are programmed in C++ and connected to Python using Cython.

Website

Ivo Filot

2 november 2020

Course on Robust Policies for Operations Management Problems

This publication concerns the overview and lecture notes for the course Robust policies for operations management problems. For all other materials, please check the resources (part 1-5) and the links to the web lectures. Societal and industrial parties are facing uncertainties in demands, costs, and many more parameters on which their revenues based. So, the important question is: how companies are making decisions while many of the decision parameters are uncertain? In this resources related to this course we will learn how to answer this question from the perspective of “robustness". This is concept that helps us to make decisions that are not vulnerable to the changes in the uncertain parameters. So, most important concept that will be discussed is: Robustness in Optimization problems. Robustness is critical, especially in making strategic and tactical decisions, which are the decisions that are optimal for a long time. Furthermore, it is important to know how the companies should react to the realization of an uncertain parameter. For instance, what companies should do when the demand is known, the prices are set, the weather condition is known, and etcetera. Learning objectives: Different ways of formulating optimization problems Robust decisions methods to solve or approximate the formulated optimization problems Apply these methods to Operation Management problems and real-life cases. This course consists of 5 modules: -Module 1: Introduction and motivation 1.A: Lecture: Introduction 1.B: Lecture Motivation -Module 2: Static robust optimization 2.A: Robust Conterpart 2.B: Vertex enumeration 2.C: Robust Facility Location 2.D: Uncertainty set Selection -Module 3: Adaptive robust optimizationo What the idea behind Finite Adaptibility is and how to formulate it mathematically. 3.A: Adaptivity in optimization - Adaptive robust optimization - •Difference with (static) RO 3.B: Finitely adaptability 3.C: Affine decision rules 3.D: Finite scenario approach -Module 4: Robust optimization with integer variable 4.A: Lecture 4.B: Excercise and solutions -Module 5: Art of modeling

Document

Ahmadreza Marandi

2020

Three-dimensional chemical structures.

Anaglyph projection No need for expensive hardware. Simple pair of red/cyan glasses will do! Atomic orbitals Readily project the atomic orbitals, up to and including the f-orbitals. Elementary reaction steps Browse through chemical reactions by sliding the reaction coordinate.

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Ivo Filot